c++ - Unable to generate makefile for basic PETSc program -


i have basic program using petsc

 #include "petsc/petsc.h"  #include "petsc/petscsys.h"  #include "petsc/petscmat.h"   int main(int argc, char *argv[]) {      petscmpiint    rank,size;      petscinitialize(&argc,&argv,0,0);      mpi_comm_size(petsc_comm_world,&size);      mpi_comm_rank(petsc_comm_world,&rank);      petscprintf(petsc_comm_world,"number of processors = %d, rank = %d\n",size,rank);      petscsynchronizedprintf(petsc_comm_world,"synchronized rank = %d\n",rank);       mpi_barrier(petsc_comm_world);  petscfinalize();      return 0;  }

however, got undefined reference errors petsc_comm_world, petscinitialize , other junk, when tried compile using mpic++

i trying use build , cmake. attempt @ cmakelists

 cmake_minimum_required(version 2.8)   project(checkmpi)   set(cmake_module_path "${cmake_source_dir}/cmake-modules")   set(petsc_arch linux-gnu)  set(petsc_dir l${project_source_dir}/third-party/petsc)   find_package(petsc required)   include_directories(${petsc_includes})  add_definitions(${petsc_definitions})   add_executable(checkmpi checkmpi.cpp)   target_link_libraries(checkmpi ${petsc_libraries})

in addition, have directory cmake-modules containing cmake-modules petsc

however, when try generate makefile typing ccmake .. , c, output 

cmake error @ cmake-modules/findpetsc.cmake:127 (message):    pair petsc_dir=l/directory/hpc/third-party/petsc    petsc_arch=linux-gnu not specify valid petsc installation  call stack (most recent call first):    cmakelists.txt:10 (find_package)   cmake error @ /usr/share/cmake/modules/findpackagehandlestandardargs.cmake:108 (message):    petsc not found.  sure set petsc_dir , petsc_arch.    (missing: petsc_includes petsc_libraries petsc_executable_runs)  call stack (most recent call first):    /usr/share/cmake/modules/findpackagehandlestandardargs.cmake:315

anyone can help?

based on findpetsc.cmake seems default options petsc_arch are: 

linux-gnu-c-debug  linux-gnu-c-opt x86_64-unknown-linux-gnu  i386-unknown-linux-gnu

or 1 have used in case of manual build.

cmake tries find file ${petsc_dir}/${petsc_arch}/include/petscconf.h or ${petsc_dir}/bmake/${petsc_arch}/petscconf.h.


-

Comments

Post a Comment

Popular posts from this blog

apache - PHP Soap issue while content length is larger -

we have developed soap based webservice post data third party webservice. accepts 4 params. in 1 of parameters accepts xml string no size limit restriction put in place. the webservice works fine in local environment running on php 5.2 , apache2. works content length long 10 mb. in staging server running nginx , php fpm.we have updated max post size , max upload filesize in php.ini , client_max_body param in nginx.conf allow upto 50 mb. but webservice client keeps on loading in staging environment. gives 502 timeout , gives soap error. can me understand issue here?
Read more

asynchronous - Python asyncio task got bad yield -

i confused how play around asyncio module in python 3.4. have searching api search engine, , want each search request run either parallel, or asynchronously, don't have wait 1 search finish start another. here high-level searching api build objects raw search results. search engine using kind of asyncio mechanism, won't bother that. # no asyncio module used here class search(object): ... self.s = some_search_engine() ... def searching(self, *args, **kwargs): ret = {} # raw searching according args , kwargs , build wrapped results ... return ret to try async requests, wrote following test case test how can interact stuff asyncio module. # here testing script @asyncio.coroutine def handle(f, *args, **kwargs): r = yield f(*args, **kwargs) return r s = search() loop = asyncio.get_event_loop() loop.run_until_complete(handle(s.searching, arg1, arg2, ...)) loop.close() by running pytest, return runtimeerror: task got bad yield : {results s...
Read more

javascript - Complete OpenIDConnect auth when requesting via Ajax -

the normal openidconnect server works like: you go a.com/secure-resource you 302 server your browser handles , sends identity server you login there it sends a.com via post you logged in on a.com , a.com/secure-resource on browser. however have scenario i'm trying solve need help. the user logged in on idserver the user logged in on a.com the user not logged in on b.com we need send ajax call web server b.com (from domain a.com ) b.com configured use openidconnect. but because request b.com via ajax, user cannot redirected idserver. (all in response 302 ) we can go ahead , handle 302 via ajax (i'm still not sure whether work, security-wise). but is there scenario in identityserver/openidconnect designed these situations? with identityserver in scenario setup server b.com use bearer token authentication, need use access token provided a.com in headers of ajax call $.ajax({ url: 'http://b.com', headers: { ...
Read more